seq id strain atcc bacterium no 10 Search Results


94
ATCC desulfovibrio desulfuricans strain g20
Desulfovibrio Desulfuricans Strain G20, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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92
Thermo Fisher snp nlrp3 c 31451929 10
Frequency of the <t> NLRP3 </t> variant in the total population and according to type of new clinical events and sex.
Snp Nlrp3 C 31451929 10, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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94
ATCC vibrio fischeri
Frequency of the <t> NLRP3 </t> variant in the total population and according to type of new clinical events and sex.
Vibrio Fischeri, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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92
ATCC by4742 genomic dna
Frequency of the <t> NLRP3 </t> variant in the total population and according to type of new clinical events and sex.
By4742 Genomic Dna, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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92
ATCC i ditiola pezizaeformis i strain atcc13299
Frequency of the <t> NLRP3 </t> variant in the total population and according to type of new clinical events and sex.
I Ditiola Pezizaeformis I Strain Atcc13299, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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96
ATCC thraustochytrium aureum atcc 34304 derived ubiquitin promoter ptracer cmv bsd lacz derived blasticidin resistant gene
Frequency of the <t> NLRP3 </t> variant in the total population and according to type of new clinical events and sex.
Thraustochytrium Aureum Atcc 34304 Derived Ubiquitin Promoter Ptracer Cmv Bsd Lacz Derived Blasticidin Resistant Gene, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 96 stars, based on 1 article reviews
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90
OriGene rabbit polyclonal anti e2f1
A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to <t>E2F1,</t> BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.
Rabbit Polyclonal Anti E2f1, supplied by OriGene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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95
ATCC strains atcc 12384
A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to <t>E2F1,</t> BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.
Strains Atcc 12384, supplied by ATCC, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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94
ATCC desulfomicrobium baculatum strain dsm 4028
A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to <t>E2F1,</t> BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.
Desulfomicrobium Baculatum Strain Dsm 4028, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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99
ATCC gggcatacattgttttgaagaaatcattgtggttctttatgcttattccacttcgaatgatattgaa
A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to <t>E2F1,</t> BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.
Gggcatacattgttttgaagaaatcattgtggttctttatgcttattccacttcgaatgatattgaa, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 99 stars, based on 1 article reviews
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91
DSMZ strain name strain number seq id no rhodotorula glutinis dsmz seq id
A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to <t>E2F1,</t> BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.
Strain Name Strain Number Seq Id No Rhodotorula Glutinis Dsmz Seq Id, supplied by DSMZ, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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95
ATCC strain atcc 21588
A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to <t>E2F1,</t> BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.
Strain Atcc 21588, supplied by ATCC, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Frequency of the  NLRP3  variant in the total population and according to type of new clinical events and sex.

Journal: Journal of Immunology Research

Article Title: The NLRP3 Genetic Variant (rs10754555) Reduces the Risk of Adverse Outcome in Middle-Aged Patients with Chronic Coronary Syndrome

doi: 10.1155/2022/2366695

Figure Lengend Snippet: Frequency of the NLRP3 variant in the total population and according to type of new clinical events and sex.

Article Snippet: Allelic discrimination of the NLRP3 variant (rs10754555, C ⟶ G substitution) was performed with real-time PCR on the ViiATM7 instrument (Applied Biosystems by Life Technologies, CA 92008 USA), using the TaqMan single nucleotide polymorphism (SNP) assay ID C_31451929_10 (Life Technologies dba Invitrogen, Pleasanton, California, USA) and TaqMan TM Genotyping Master Mix (Applied Biosystems by Thermo Fisher Scientific, Baltics UAB, Lithuania).

Techniques: Variant Assay

Frequency of the  NLRP3  variant according to comorbidity at baseline.

Journal: Journal of Immunology Research

Article Title: The NLRP3 Genetic Variant (rs10754555) Reduces the Risk of Adverse Outcome in Middle-Aged Patients with Chronic Coronary Syndrome

doi: 10.1155/2022/2366695

Figure Lengend Snippet: Frequency of the NLRP3 variant according to comorbidity at baseline.

Article Snippet: Allelic discrimination of the NLRP3 variant (rs10754555, C ⟶ G substitution) was performed with real-time PCR on the ViiATM7 instrument (Applied Biosystems by Life Technologies, CA 92008 USA), using the TaqMan single nucleotide polymorphism (SNP) assay ID C_31451929_10 (Life Technologies dba Invitrogen, Pleasanton, California, USA) and TaqMan TM Genotyping Master Mix (Applied Biosystems by Thermo Fisher Scientific, Baltics UAB, Lithuania).

Techniques: Variant Assay

Frequency (%) of the NLRP3 (rs107545555 C/G) polymorphism according to clinical outcome dichotomized according to age at the 25 percentile level (56 years). Blue, orange, and pale orange columns represent homozygous wild type (CC), heterozygous (CG), and homozygous of the gene variant (GG), respectively. p values represent difference in genotype frequencies according to endpoint (chi square test) between CC, CG, and GG genotypes (2 × 3 table) between CC and CG genotypes (2 × 2 table), and between the CC genotype and the G-allele (CG/GG combined) (2 × 2 table).

Journal: Journal of Immunology Research

Article Title: The NLRP3 Genetic Variant (rs10754555) Reduces the Risk of Adverse Outcome in Middle-Aged Patients with Chronic Coronary Syndrome

doi: 10.1155/2022/2366695

Figure Lengend Snippet: Frequency (%) of the NLRP3 (rs107545555 C/G) polymorphism according to clinical outcome dichotomized according to age at the 25 percentile level (56 years). Blue, orange, and pale orange columns represent homozygous wild type (CC), heterozygous (CG), and homozygous of the gene variant (GG), respectively. p values represent difference in genotype frequencies according to endpoint (chi square test) between CC, CG, and GG genotypes (2 × 3 table) between CC and CG genotypes (2 × 2 table), and between the CC genotype and the G-allele (CG/GG combined) (2 × 2 table).

Article Snippet: Allelic discrimination of the NLRP3 variant (rs10754555, C ⟶ G substitution) was performed with real-time PCR on the ViiATM7 instrument (Applied Biosystems by Life Technologies, CA 92008 USA), using the TaqMan single nucleotide polymorphism (SNP) assay ID C_31451929_10 (Life Technologies dba Invitrogen, Pleasanton, California, USA) and TaqMan TM Genotyping Master Mix (Applied Biosystems by Thermo Fisher Scientific, Baltics UAB, Lithuania).

Techniques: Variant Assay

Relatively quantified gene expression (mRNA levels) of  NLRP3,  TLR4, IL-1 β , and IL-18 genes as related to NLRP3 genotypes in the total population.

Journal: Journal of Immunology Research

Article Title: The NLRP3 Genetic Variant (rs10754555) Reduces the Risk of Adverse Outcome in Middle-Aged Patients with Chronic Coronary Syndrome

doi: 10.1155/2022/2366695

Figure Lengend Snippet: Relatively quantified gene expression (mRNA levels) of NLRP3, TLR4, IL-1 β , and IL-18 genes as related to NLRP3 genotypes in the total population.

Article Snippet: Allelic discrimination of the NLRP3 variant (rs10754555, C ⟶ G substitution) was performed with real-time PCR on the ViiATM7 instrument (Applied Biosystems by Life Technologies, CA 92008 USA), using the TaqMan single nucleotide polymorphism (SNP) assay ID C_31451929_10 (Life Technologies dba Invitrogen, Pleasanton, California, USA) and TaqMan TM Genotyping Master Mix (Applied Biosystems by Thermo Fisher Scientific, Baltics UAB, Lithuania).

Techniques: Gene Expression

Change in gene expression (mRNA levels) of NLRP3, TLR4, IL-1 β , and IL-18 according to NLRP3 genotypes. Blue, orange, and pale orange columns represent homozygous wild type (CC), heterozygous (CG), and homozygous of the gene variant (GG), respectively. Results are dichotomized according to age at the 25 percentile level (56 years). p values represent difference in gene expression of each marker between the CC genotype and the G-allele (CG/GG combined) (Mann–Whitney test).

Journal: Journal of Immunology Research

Article Title: The NLRP3 Genetic Variant (rs10754555) Reduces the Risk of Adverse Outcome in Middle-Aged Patients with Chronic Coronary Syndrome

doi: 10.1155/2022/2366695

Figure Lengend Snippet: Change in gene expression (mRNA levels) of NLRP3, TLR4, IL-1 β , and IL-18 according to NLRP3 genotypes. Blue, orange, and pale orange columns represent homozygous wild type (CC), heterozygous (CG), and homozygous of the gene variant (GG), respectively. Results are dichotomized according to age at the 25 percentile level (56 years). p values represent difference in gene expression of each marker between the CC genotype and the G-allele (CG/GG combined) (Mann–Whitney test).

Article Snippet: Allelic discrimination of the NLRP3 variant (rs10754555, C ⟶ G substitution) was performed with real-time PCR on the ViiATM7 instrument (Applied Biosystems by Life Technologies, CA 92008 USA), using the TaqMan single nucleotide polymorphism (SNP) assay ID C_31451929_10 (Life Technologies dba Invitrogen, Pleasanton, California, USA) and TaqMan TM Genotyping Master Mix (Applied Biosystems by Thermo Fisher Scientific, Baltics UAB, Lithuania).

Techniques: Gene Expression, Variant Assay, Marker, MANN-WHITNEY

Circulating levels of markers as related to  NLRP3  genotypes in the total population.

Journal: Journal of Immunology Research

Article Title: The NLRP3 Genetic Variant (rs10754555) Reduces the Risk of Adverse Outcome in Middle-Aged Patients with Chronic Coronary Syndrome

doi: 10.1155/2022/2366695

Figure Lengend Snippet: Circulating levels of markers as related to NLRP3 genotypes in the total population.

Article Snippet: Allelic discrimination of the NLRP3 variant (rs10754555, C ⟶ G substitution) was performed with real-time PCR on the ViiATM7 instrument (Applied Biosystems by Life Technologies, CA 92008 USA), using the TaqMan single nucleotide polymorphism (SNP) assay ID C_31451929_10 (Life Technologies dba Invitrogen, Pleasanton, California, USA) and TaqMan TM Genotyping Master Mix (Applied Biosystems by Thermo Fisher Scientific, Baltics UAB, Lithuania).

Techniques:

Levels of circulating IL-6, hs CRP, IL-18, and IL-12 according to NLRP3 genotypes Blue, orange, and pale orange columns represent homozygous wild type (CC), heterozygous (CG), and homozygous of the gene variant (GG), respectively. Results are dichotomized according to age at the 25 percentile level (56 years). p values represent difference in circulating levels of each marker between the CC genotype and CG/GG combined (Mann–Whitney test).

Journal: Journal of Immunology Research

Article Title: The NLRP3 Genetic Variant (rs10754555) Reduces the Risk of Adverse Outcome in Middle-Aged Patients with Chronic Coronary Syndrome

doi: 10.1155/2022/2366695

Figure Lengend Snippet: Levels of circulating IL-6, hs CRP, IL-18, and IL-12 according to NLRP3 genotypes Blue, orange, and pale orange columns represent homozygous wild type (CC), heterozygous (CG), and homozygous of the gene variant (GG), respectively. Results are dichotomized according to age at the 25 percentile level (56 years). p values represent difference in circulating levels of each marker between the CC genotype and CG/GG combined (Mann–Whitney test).

Article Snippet: Allelic discrimination of the NLRP3 variant (rs10754555, C ⟶ G substitution) was performed with real-time PCR on the ViiATM7 instrument (Applied Biosystems by Life Technologies, CA 92008 USA), using the TaqMan single nucleotide polymorphism (SNP) assay ID C_31451929_10 (Life Technologies dba Invitrogen, Pleasanton, California, USA) and TaqMan TM Genotyping Master Mix (Applied Biosystems by Thermo Fisher Scientific, Baltics UAB, Lithuania).

Techniques: Variant Assay, Marker, MANN-WHITNEY

A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to E2F1, BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.

Journal: Gynecologic oncology

Article Title: Panobinostat sensitizes cyclin E high, homologous recombination-proficient ovarian cancer to olaparib

doi: 10.1016/j.ygyno.2016.07.088

Figure Lengend Snippet: A) Raw RSEM RNA-Seq counts for 265 TCGA ovarian tumors. CCNE1 (cyclin E) expression was compared to E2F1, BRCA1 and RAD51 (Spearman correlation). B) CCNE1 copy number in CCLE ovarian cancer cell lines. C) Spearman correlation of cyclin E and E2F1 mRNA levels in CCLE cell lines most representative of serous ovarian cancer (similarity score >1) based on ref [29]. D) Western blot analysis of cyclin E and E2F1 expression in representative CCLE cell lines. Actin was the loading control.

Article Snippet: Antibodies used were rabbit polyclonal anti-cyclin E (Abcam, Cambridge, MA), rabbit polyclonal anti-E2F1 (DBA Acris Antibodies, Inc, Rockville, MD), rabbit polyclonal anti-RAD51 (Millipore), mouse monoclonal anti-BRCA1 (Millipore), rabbit polyclonal anti-PARP (Cell Signaling Technology), mouse monoclonal anti-PCNA (Santa Cruz Biotechnology, Inc., Dallas, TX), rabbit polyclonal anti-cleaved caspase-3 (Cell Signaling Technology), and mouse monoclonal anti-pH2AX (Ser139) (Millipore).

Techniques: RNA Sequencing Assay, Expressing, Western Blot

A) Concentration-dependent effects of panobinostat and vorinostat in SRB viability assays in OVCAR-3 cells (72h). Values are mean+SE of 3 independent experiments. B) Western blot analysis of the effects of panobinostat (25nM), vorinostat (5µM) and romidepsin (10nM) on expression of cyclin E1, E2F1, BRCA1, cleaved PARP and acetylated histone H3 in OVCAR-3 cells. Actin and histone H3 were loading controls. C) Effects of the panobinostat pre-treatment (25nM; 24h)/panobinostat (25nM; 24h) and olaparib (10µM) co-treatment combination regimen (24h) on cyclin E, E2F1 and BRCA1 expression in OVCAR-3 cells (24h). Actin was the loading control.

Journal: Gynecologic oncology

Article Title: Panobinostat sensitizes cyclin E high, homologous recombination-proficient ovarian cancer to olaparib

doi: 10.1016/j.ygyno.2016.07.088

Figure Lengend Snippet: A) Concentration-dependent effects of panobinostat and vorinostat in SRB viability assays in OVCAR-3 cells (72h). Values are mean+SE of 3 independent experiments. B) Western blot analysis of the effects of panobinostat (25nM), vorinostat (5µM) and romidepsin (10nM) on expression of cyclin E1, E2F1, BRCA1, cleaved PARP and acetylated histone H3 in OVCAR-3 cells. Actin and histone H3 were loading controls. C) Effects of the panobinostat pre-treatment (25nM; 24h)/panobinostat (25nM; 24h) and olaparib (10µM) co-treatment combination regimen (24h) on cyclin E, E2F1 and BRCA1 expression in OVCAR-3 cells (24h). Actin was the loading control.

Article Snippet: Antibodies used were rabbit polyclonal anti-cyclin E (Abcam, Cambridge, MA), rabbit polyclonal anti-E2F1 (DBA Acris Antibodies, Inc, Rockville, MD), rabbit polyclonal anti-RAD51 (Millipore), mouse monoclonal anti-BRCA1 (Millipore), rabbit polyclonal anti-PARP (Cell Signaling Technology), mouse monoclonal anti-PCNA (Santa Cruz Biotechnology, Inc., Dallas, TX), rabbit polyclonal anti-cleaved caspase-3 (Cell Signaling Technology), and mouse monoclonal anti-pH2AX (Ser139) (Millipore).

Techniques: Concentration Assay, Western Blot, Expressing